Genome sequence

 

# of Contigs: 134,161
Total length: 2,263,004,917 bp
Update date: 2014-05-09
BioProject: PRJNA210951
BioSample: SAMN02729226
Keywords: WGS
Div: MAM
Organism: Ursus maritimus – show lineagehide lineage
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Biosource:
/collection_date = May-2009
/country = China: Dalian Hutan Marine Animal Protection and Research Institute
/isolate = Baiyulong
/mol_type = genomic
/sex = male
/tissue_type = muscle sample
WGS: AVOR01000001:AVOR01134161
Scaffolds: KK498505:KK499763
1,259 scaffolds, total length is 2,287,049,287 bases
Reference:
Population genomics reveal recent speciation and rapid evolutionary adaptation in polar bears : Cell 157 (4), 785-794 (2014) – show 29 authorshide authors
Liu,S., Lorenzen,E.D., Fumagalli,M., Li,B., Harris,K., Xiong,Z., Zhou,L., Korneliussen,T.S., Somel,M., Babbitt,C., Wray,G., Li,J., He,W., Wang,Z., Fu,W., Xiang,X., Morgan,C.C., Doherty,A., O'Connell,M.J., McInerney,J.O., Born,E.W., Dalen,L., Dietz,R., Orlando,L., Sonne,C., Zhang,G., Nielsen,R., Willerslev,E., Wang,J.
Submission:
Submitted (12-AUG-2013) China National Genebank, BGI-Shenzhen, 2nd Office Building, Beishan Industrial Zone, Beishan Road, Yantian District, Shenzhen, Guangdong 518083, China – Liu,S., Li,B., Zhang,G.

The Ursus maritimus whole genome shotgun (WGS) project has the project accession AVOR00000000. This version of the project (01) has the accession number AVOR01000000, and consists of sequences AVOR01000001-AVOR01134161.

##Genome-Assembly-Data-START##
Assembly Method : SOAPdenovo v. 1.05
Assembly Name : UrsMar_1.0
Genome Coverage : 101x
Sequencing Technology : Illumina Genome Analyzer II
##Genome-Assembly-Data-END##